Repositories list

• phenopolis_genomics_browser

  Public
  Python API and React frontend for the Phenopolis Genomics Browser

  SCSS

  •

  MIT License

  •22 forks•3030 stars•7373 issues•33 pull requests•Updated Mar 12, 2026Mar 12, 2026

• pluto

  Public
  A fast and convenient image processing library

  crystalpngjpeg+ 6

  crystalpngjpegimage-processingwebpppmlossylosslesscrystal-lang

  Crystal

  •

  ISC License

  •66 forks•7474 stars•99 issues•00 pull requests•Updated Jan 31, 2025Jan 31, 2025

• visual_fields_extraction

  Public
  Python scripting framework for extraction data from Humphrey Visual Fields

  Python

  •

  GNU General Public License v3.0

  •55 forks•00 stars•33 issues•00 pull requests•Updated Jan 28, 2025Jan 28, 2025

• aws_batch_env

  Public
  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 14, 2024Nov 14, 2024

• twilio-verify-devise

  Public
  Twilio Verify Devise plugin to add Two-Factor Authentication

  Ruby

  •

  MIT License

  •8181 forks•00 stars•00 issues•00 pull requests•Updated Jun 25, 2024Jun 25, 2024

• jDataView

  Public
  DataView. Extended. Anywhere.

  JavaScript

  •

  MIT License

  •7878 forks•00 stars•00 issues•00 pull requests•Updated May 23, 2024May 23, 2024

• grok.cr

  Public
  Crystal bindings for Grok

  processingcrystalimage+ 12

  processingcrystalimagecompressionbindingdecompressionimage-processingbindingsjpeg2000lossy-image-compression+ 5

  C

  •

  GNU Affero General Public License v3.0

  •11 fork•1616 stars•00 issues•00 pull requests•Updated Apr 4, 2024Apr 4, 2024

• grok

  Public
  World's Leading Open Source JPEG 2000 Codec

  C++

  •

  Other

  •5858 forks•00 stars•00 issues•00 pull requests•Updated Apr 4, 2024Apr 4, 2024

• logidze

  Public
  Database changes log for Rails

  Ruby

  •

  MIT License

  •8484 forks•00 stars•00 issues•00 pull requests•Updated Feb 6, 2024Feb 6, 2024

• react-image

  Public
  React.js <img> tag rendering with multiple fallback & loader support

  JavaScript

  •

  MIT License

  •8989 forks•00 stars•00 issues•00 pull requests•Updated Nov 15, 2023Nov 15, 2023

• pheno4j

  Public
  Pheno4j: a graph based HPO to NGS database

  neo4j

  neo4j

  Java

  •

  MIT License

  •55 forks•3535 stars•33 issues•44 pull requests•Updated Jun 13, 2023Jun 13, 2023

• imagecodecs

  Public
  Image transformation, compression, and decompression codecs. Forked from https://pypi.org/project/imagecodecs

  Cython

  •

  BSD 3-Clause "New" or "Revised" License

  •3434 forks•00 stars•00 issues•00 pull requests•Updated Feb 6, 2023Feb 6, 2023

• automlbenchmark

  Public
  OpenML AutoML Benchmarking Framework

  Python

  •

  MIT License

  •150150 forks•00 stars•00 issues•00 pull requests•Updated Sep 28, 2022Sep 28, 2022

• aws-s3-zipper

  Public
  takes an amazon s3 bucket folder and zips it for streaming or serializes to a file

  JavaScript

  •6767 forks•00 stars•00 issues•00 pull requests•Updated Sep 15, 2022Sep 15, 2022

• gd.cr

  Public archive
  Crystal bindings for GD

  processingcrystalimage+ 10

  processingcrystalimagepngjpeggraphicstiffbmpimage-processingwebp+ 3

  C

  •

  ISC License

  •00 forks•11 star•00 issues•00 pull requests•Updated Aug 26, 2022Aug 26, 2022

• phenopolis

  Public
  An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data

  databaseservergenetics+ 1

  databaseservergeneticsphenotype

  JavaScript

  •

  MIT License

  •55 forks•3232 stars•4646 issues•33 pull requests•Updated Jul 6, 2022Jul 6, 2022

• phenogenon

  Public
  A method for uncovering gene to HPO relationships.

  Python

  •33 forks•55 stars•22 issues•22 pull requests•Updated Jun 21, 2022Jun 21, 2022

• OCT-Converter

  Public
  Tools for extracting the raw optical coherence tomography (OCT) and fundus data from proprietary file formats.

  Python

  •

  MIT License

  •8585 forks•00 stars•00 issues•00 pull requests•Updated Feb 2, 2022Feb 2, 2022

• nextflow-genome

  Public
  nextflow pipelines for *omes

  Nextflow

  •00 forks•44 stars•44 issues•00 pull requests•Updated Jun 1, 2021Jun 1, 2021

• hail-on-AWS-spot-instances

  Public
  An option to spin cost effective EMR clusters in AWS with Hail and JupyterNotebook installed

  Python

  •

  Apache License 2.0

  •1717 forks•00 stars•00 issues•00 pull requests•Updated May 8, 2020May 8, 2020

• covid19-handbook

  Public
  Collaborative handbook for covid-19

  00 forks•00 stars•11 issue•00 pull requests•Updated May 8, 2020May 8, 2020

• phenopolis_api_schema

  Public
  A schema defining the API between the phenopolis frontend and backend

  CSS

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 15, 2018Dec 15, 2018

• phenopolis_backend_pheno4j

  Public
  Phenopolis backend - a flask app connecting to Pheno4J

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 20, 2018Oct 20, 2018

• Relayer_OCT

  Public
  OCT segmentation code for RELAYER

  MATLAB

  •11 fork•00 stars•00 issues•00 pull requests•Updated Aug 20, 2018Aug 20, 2018

• phenopolis.github.io

  Public
  redirects to phenopolis website (www.phenopolis.org)

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 1, 2017Dec 1, 2017